Advancements, deficiencies, and future necessities of studying Saprolegniales: A semi-quantitative review of 1073 published papers
Masigol, H., van West, P., Taheri, S. R., Fregeneda-Grandes, J. M., Pârvulescu, L., McLaggan, D., Bliss, T. T., Mostowfizadeh-Ghalamfarsa, R., Pourmoghaddam, M. J., Grossart, H. P.
Comparative study of the effects of Montanideâ„¢ ISA 763A VG and ISA 763B VG adjuvants on the immune response against Streptococcus agalactiae in Nile tilapia (Oreochromis niloticus)
Wangkahart, E., Thongsrisuk, A., Vialle, R., Pholchamat, S., Sunthamala, P., Phudkliang, J., Srisapoome, P., Wang, T., Secombes, C. J.
Time is a stronger predictor of microbiome community composition than tissue in external mucosal surfaces of Atlantic salmon (Salmo salar) reared in a semi-natural freshwater environment
Lorgen-Ritchie, M., Chalmers, L., Clarkson, M., Taylor, J. F., Migaud, H., Martin, S. A.
Impact of abiotic factors and husbandry on saprolegniosis in salmonid farms
Tedesco, P., Saraiva, M., Sandoval-Sierra, J. V., Alves, M. T., Galuppi, R., Dieguez-Uribeondo, J., van West, P., Cook, A., Posen, P., Oidtmann, B., Fioravanti, M.
Infectious pancreatic necrosis virus (IPNV) recombinant viral protein 1 (VP1) and VP2-Flagellin fusion protein elicit distinct expression profiles of cytokines involved in type 1, type 2, and regulatory T cell response in rainbow trout (Oncorhynchus mykiss)
Wong-Benito, V., Barraza, F., Trujillo-Imarai, A., Ruiz-Higgs, D., Montero, R., Sandino, A. M., Wang, T., Maisey, K., Secombes, C. J., Imarai, M.
Fish & Shellfish Immunology, vol. 131, pp. 785-795
Gut Associated Lymphoid Tissue (GALT) primary cells and stable cell lines as predictive models for intestinal health in rainbow trout (Oncorhynchus mykiss)
Porter, D., Peggs, D., McGurk, C., Martin, S. A. M.
Single cell transcriptomics of Atlantic salmon (Salmo salar L.) liver reveals cellular heterogeneity and immunological responses to challenge by Aeromonas salmonicida.
Taylor, R. S., Ruiz Daniels, R., Dobie, R., Naseer, S., Clark, T. C., Henderson, N. C., Boudinot, P., Martin, S. A. M., Macqueen, D. J.
Current practices and emerging possibilities for reducing the spread of oomycete pathogens in terrestrial and aquatic production systems in the European Union
Benavent-Celma, C., López-GarcÃa, N., Ruba, T., ÅšciÅ›lak, M. E., Street-Jones, D., van West, P., Woodward, S., Witzell, J.
Interactive effects of dietary lipid and nutritional emulsifier supplementation on growth, chemical composition, immune response and lipid metabolism of juvenile Nile tilapia (Oreochromis niloticus)
Wangkahart, E., Bruneel, B., Wisetsri, T., Nontasan, S., Martin, S. A., Chantiratikul, A.
Tenebrio molitor larvae meal inclusion affects hepatic proteome and apoptosis and/or autophagy of three farmed fish species
Mente, E., Bousdras, T., Feidantsis, K., Panteli, N., Mastoraki, M., Kormas, K. A., Chatzifotis, S., Piccolo, G., Gasco, L., Gai, F., Martin, S. A. M., Antonopoulou, E.
Corrigendum: Type I Interferon Regulates the Survival and Functionality of B Cells in Rainbow Trout (Front. Immunol., (2020), 11, (1494), 10.3389/fimmu.2020.01494)
Benedicenti, O., Wang, T., Morel, E., Secombes, C. J., Soleto, I., DÃaz-Rosales, P., Tafalla, C.
Artificial Intelligence Driven Platforms to Develop Novel Assays to Monitor Fish Health
Buks, R., Hu, Y., Alnabulsi, A., Alnabulsi, A., Secombes, C., Wang, T., Martin, S.
Aquaculture Europe 2021
Contributions to Conferences: Posters
Immune response and protective efficacy of two new adjuvants, Montanideâ„¢ ISA 763B VG and Montanideâ„¢ GEL02, administered with a Streptococcus agalactiae ghost vaccine in Nile tilapia (Oreochromis niloticus)
Wangkaghart, E., Deville, S., Wang, B., Srisapoome, P., Wang, T., Secombes, C. J.
Determinants of heart rate in Svalbard reindeer reveal mechanisms of seasonal energy management
Trondrud, L. M., Pigeon, G., Albon, S., Arnold, W., Evans, A. L., Irvine, R. J., Król, E., Ropstad, E., Stien, A., Veiberg, V., Speakman, J. R., Loe, L. E.
Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 376, no. 1831, 20200215
Fat storage influences fasting endurance more than body size in an ungulate
Trondrud, L. M., Pigeon, G., Król, E., Albon, S., Evans, A. L., Arnold, W., Hambly, C., Irvine, R. J., Ropstad, E., Stien, A., Veiberg, V., Speakman, J. R., Loe, L. E.
Montanideâ„¢ ISA 763A VG and ISA 761 VG induce different immune pathway responses in rainbow trout (Oncorhynchus mykiss) when used as adjuvant for an Aeromonas salmonicida bacterin
Veenstra, K. A., Wang, T., Russell, K. S., Tubbs, L., Ben Arous, J., Secombes, C. J.
Fish & Shellfish Immunology, vol. 114, pp. 171-183
Immunologic Profiling of the Atlantic Salmon Gill by Single Nuclei Transcriptomics
West, A. C., Mizoro, Y., Wood, S. H., Ince, L. M., Iversen, M., Jørgensen, E. H., Nome, T., Sandve, S. R., Martin, S. A. M., Loudon, A. S. I., Hazlerigg, D. G.
Evolutionary Analysis of Cystatins of Early-Emerging Metazoans Reveals a Novel Subtype in Parasitic Cnidarians
BartoÅ¡ová-Sojková, P., KyslÃk, J., Alama-Bermejo, G., Hartigan, A., Atkinson, S. D., Bartholomew, J. L., Picard-Sánchez, A., Palenzuela, O., Faber, M. N., Holland, J. W., Holzer, A. S.
Transcriptome analysis reveals immune pathways underlying resistance in the common carp Cyprinus carpio against the oomycete Aphanomyces invadans
Verma, D. K., Peruzza, L., Trusch, F., Yadav, M. K., Ravindra, , Shubin, S. V., Morgan, K. L., Mohindra, V., Hauton, C., van West, P., Pradhan, P. K., Sood, N.
Molecular insights into the mechanisms of susceptibility of Labeo rohita against oomycete Aphanomyces invadans
Pradhan, P. K., Verma, D. K., Peruzza, L., Gupta, S., Haq, S. A., Shubin, S. V., Morgan, K. L., Trusch, F., Mohindra, V., Hauton, C., van West, P., Sood, N.
Ancient Cytokine Interleukin 15-Like (IL-15L) Induces a Type 2 Immune Response
Yamaguchi, T., Chang, C. J., Karger, A., Keller, M., Pfaff, F., Wangkahart, E., Wang, T., Secombes, C. J., Kimoto, A., Furihata, M., Hashimoto, K., Fischer, U., Dijkstra, J. M.
The structural variation landscape in 492 Atlantic salmon genomes
Bertolotti, A. C., Layer, R. M., Gundappa, M. K., Gallagher, M. D., Pehlivanoglu, E., Nome, T., Robledo, D., Kent, M. P., Røsæg, L. L., Holen, M. M., Mulugeta, T. D., Ashton, T. J., Hindar, K., Sægrov, H., Florø-Larsen, B., Erkinaro, J., Primmer, C. R., Bernatchez, L., Martin, S. A. M., Johnston, I. A., Sandve, S. R., Lien, S., MacQueen, D. J.
Effective isolation of GALT cells: Insights into the intestine immune response of rainbow trout (Oncorhynchus mykiss) to different bacterin vaccine preparations
Attaya, A., Secombes, C. J., Wang, T.
Fish & Shellfish Immunology, vol. 105, pp. 378-392
Harnessing genomics to fast-track genetic improvement in aquaculture
Houston, R. D., Bean, T. P., MacQueen, D. J., Gundappa, M. K., Jin, Y. H., Jenkins, T. L., Selly, S. L. C., Martin, S. A. M., Stevens, J. R., Santos, E. M., Davie, A., Robledo, D.
Nature Reviews Genetics, vol. 21, no. 7, pp. 389-409
Integration of Transcriptome, Gross Morphology and Histopathology in the Gill of Sea Farmed Atlantic Salmon (Salmo salar): Lessons from Multi-site Sampling
Krol, E., Noguera, P., Shaw, S., Costelloe, E., Gajardo, K., Valdenegro, V., Bickerdike, R., Douglas, A., Martin, S. A. M.
Host and pathogen autophagy are central to the inducible local defences and systemic response of the giant kelp Macrocystis pyrifera against the oomycete pathogen Anisolpidium ectocarpii
Murua, P., Müller, D. G., Etemadi, M., van West, P., Gachon, C. M. M.
Morphological, genotypic and metabolomic signatures confirm interfamilial hybridization between the ubiquitous kelps Macrocystis (Arthrothamnaceae) and Lessonia (Lessoniaceae)
Murúa, P., Edrada-Ebel, R., Munoz, L., Soldatou, S., Legrave, N., Müller, D. G., Patino, D., van West, P., Kuepper, F., Westermeier, R., Ebel, R., Peters, A. F.
Supplementation of arginine, ornithine and citrulline in rainbow trout (Oncorhynchus mykiss): Effects on growth, amino acid levels in plasma and gene expression responses in liver tissue
Clark, T. C., Tinsley, J., Sigholt, T., Macqueen, D. J., Martin, S. A. M.
Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology, vol. 241, 110632
Expansion of fish CCL20_like chemokines by genome and local gene duplication: Characterisation and expression analysis of 10 CCL20_like chemokines in rainbow trout (Oncorhynchus mykiss)
Liu, F., Wang, T., Hu, Y., Tian, G., Secombes, C. J., Wang, T.
Developmental and Comparative Immunology, vol. 103, 103502
Identification, molecular characterization and functional analysis of interleukin (IL)-2 and IL-2like (IL-2L) cytokines in sea bass (Dicentrarchus labrax L.)
Buonocore, F., Gerdol, M., Pallavicini, A., Stocchi, V., Randelli, E., Belardinelli, M. C., Miccoli, A., Saraceni, P. R., Secombes, C. J., Scapigliati, G., Wang, T.
Evolution of IFN subgroups in bony fish - 1: Group I-III IFN exist in early ray-finned fish, with group II IFN subgroups present in the Holostean spotted gar, Lepisosteus oculatus
Liu, F., Bols, N. C., Pham, P. H., Secombes, C. J., Zou, J.
Different origins of paralogues of salmonid TNR1 and TNFR2: characterisation and expression analysis of four TNF receptor genes in rainbow trout Oncorhynchus mykiss
Hong, S., Wang, T., Secombes, C. J., Wang, T.
Developmental and Comparative Immunology, vol. 99, 103403
Distinct response of immune gene expression in peripheral blood leucocytes modulated by bacterin vaccine candidates in rainbow trout Oncorhynchus mykiss : A potential in vitro screening and batch testing system for vaccine development in aquaculture
Viral Resistance and IFN Signaling in STAT2 Knockout Fish Cells
Dehler, C. E., Lester, K., Della Pelle, G., Jouneau, L., Houel, A., Collins, C., Dovgan, T., Machat, R., Zou, J., Boudinot, P., Martin, S. A. M., Collet, B.
The Journal of Immunology, vol. 203, no. 2, pp. 465-475
Lineage/species-specific expansion of the Mx gene family in teleosts: Differential expression and modulation of nine Mx genes in rainbow trout Oncorhynchus mykiss
Wang, T., Liu, F., Tian, G., Secombes, C. J., Wang, T.