Publications | The School of Biological Sciences

Single cell transcriptomics of Atlantic salmon (Salmo salar L.) liver reveals cellular heterogeneity and immunological responses to challenge by Aeromonas salmonicida.

2022

Taylor, R. S., Ruiz Daniels, R., Dobie, R., Naseer, S., Clark, T. C., Henderson, N. C., Boudinot, P., Martin, S. A. M., Macqueen, D. J.

Frontiers in Immunology, vol. 13, 984799

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2022.984799
Open Access: http://aura.abdn.ac.uk/bitstream/2164/19577/1/Taylor_et_al_Single_cell_Frontiers_in_Immunology_vor.pdf

Immune responses to prebiotics in farmed salmonid fish: How transcriptomic approaches help interpret responses

2022

Porter, D., Peggs, D., McGurk, C., Martin, S.

Fish & Shellfish Immunology, vol. 127, pp. 35-47

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fsi.2022.05.055
Open Access: http://aura.abdn.ac.uk/bitstream/2164/20769/1/Porter_etal_FSI_Immune_Responses_To_VoR.pdf

Current practices and emerging possibilities for reducing the spread of oomycete pathogens in terrestrial and aquatic production systems in the European Union

2022

Benavent-Celma, C., López-García, N., Ruba, T., Ściślak, M. E., Street-Jones, D., van West, P., Woodward, S., Witzell, J.

Fungal Biology Reviews, vol. 40, pp. 19-36

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.fbr.2021.10.001

Can Ulcerative Dermal Necrosis (UDN) in Atlantic salmon be attributed to ultraviolet radiation and secondary Saprolegnia parasitica infections?

2022

Henard, C., Saraiva, M. R., Ściślak, M. E., Ruba, T., McLaggan, D., Noguera, P., van West, P.

Fungal Biology Reviews, vol. 40, pp. 70-75

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1016/j.fbr.2022.02.002
Open Access: http://aura.abdn.ac.uk/bitstream/2164/18504/1/Henard_et_al_Can_Ulcerative_Fungal_Biology_Reviews_vor.pdf
Additional Links: View publication in Scopus

Myxozoan Research Forum 2021 - the ‘MyxoMixer’: Advances, methods, and problems yet to be solved in myxozoan research

2022

Holland, J., Holzer, A.

Bulletin of the European Association of Fish Pathologists, vol. 41, no. 5, pp. 216-224

Contributions to Journals: Special Issues

Online: https://eafpbulletin.scholasticahq.com/article/36864-myxozoan-research-forum-2021-the-myxomixer-advances-methods-and-problems-yet-to-be-solved-in-myxozoan-research
Digital Object Identifier: https://doi.org/10.48045/001c.36864
Open Access: http://aura.abdn.ac.uk/bitstream/2164/25475/1/Holland_etHolzer_BEAFP_Myxozoan_Research_Forum_VOR.pdf

Genome-wide reconstruction of rediploidization following autopolyploidization across one hundred million years of salmonid evolution

2022

Gundappa, M. K., To, T., Grønvold, L., Martin, S. A. M., Lien, S., Geist, J., Hazlerigg, D., Sandve, S. R., Macqueen, D. J.

Molecular Biology and Evolution, vol. 39, no. 1, msab310

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1093/molbev/msab310
Open Access: http://aura.abdn.ac.uk/bitstream/2164/18010/1/Gundappa_etal_Genome_wide_reconstruction_of_VOR.pdf

Transformation systems, gene silencing and gene editing technologies in oomycetes

2021 - E-pub ahead of print

Ghimire, B., Saraiva, M., Andersen, C. B., Gogoi, A., Saleh, M., Zic, N., van West, P., Brurberg, M. B.

Fungal Biology Reviews

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1016/j.fbr.2021.11.001
Additional Links: View publication in Scopus

CD38 Defines a Subset of B Cells in Rainbow Trout Kidney With High IgM Secreting Capacities

2021

Martín, D., Perdiguero, P., Morel, E., Soleto, I., Herranz-Jusdado, J. G., Ramón, L. A., Abós, B., Wang, T., Díaz-Rosales, P., Tafalla, C.

Frontiers in Immunology, vol. 12, 773888

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/fimmu.2021.773888
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17878/1/Martin_et_al_Defines_Subset_Frontiers_in_Immunology_vor.pdf
Additional Links: View publication in Scopus

Phylogenetic and Functional Diversity of Saprolegniales and Fungi Isolated from Temperate Lakes in Northeast Germany

2021

Masigol, H., Woodhouse, J. N., van West, P., Mostowfizadeh-Ghalamfarsa, R., Rojas-Jimenez, K., Goldhammer, T., Khodaparast, S. A., Grossart, H.

Journal of Fungi, vol. 7, no. 11, 968

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/jof7110968
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17509/1/Masigol_etal_JF_Phylogenetic_And_Functional_VoR.pdf

Sampling the fish gill microbiome: a comparison of tissue biopsies and swabs

2021

Clinton, M., Wyness, A. J., Martin, S. A., Brierley, A. S., Ferrier, D. E.

BMC Microbiology, vol. 21, 313

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1186/s12866-021-02374-0
Open Access: http://aura.abdn.ac.uk/bitstream/2164/17638/1/Clinton_etal_BMC_sampling_the_fish_VOR.pdf
Additional Links: View publication in Scopus