Publications | The School of Natural and Computing Sciences

Significant dose-dependent reduction in neurofilament light chain concentration in plasma with oral tau aggregation inhibitor hydromethylthionine mesylate

2023

Wischik, C. M., Schelter, B., Penny, L. K., Miller, S., Stefanacci, R., Heslegrave, A., Zetterberg, H.

Alzheimer's Dementia, vol. 19, no. S24, e083153

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1002/alz.083153

Identification of the host reservoir of SARS-CoV-2 and determining when it spilled over into humans

2023

Pamjula, V., Strachan, N., Perez-Reche, F.

Working Papers and Discussion Papers

Digital Object Identifier: https://doi.org/10.1101/2023.11.25.568670

Ultra-slow dynamics of free-running ring lasers: towards a minimal model

2023

Giacomelli, G., Politi, A.

Working Papers and Discussion Papers

Online: https://arxiv.org/pdf/2311.14504.pdf
Digital Object Identifier: https://doi.org/10.48550/arXiv.2311.14504

The complementary contribution of each order topology into the synchronization of multi-order networks

2023

Ren, X., Lei, Y., Grebogi, C., Baptista, M. S.

Chaos, vol. 33, no. 11, 111101

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1063/5.0177687
Open Access: http://aura.abdn.ac.uk/bitstreams/dbfd9d0a-2c52-4169-80ce-02eb79e80938/download

Dynamic calcium-mediated stress response and recovery signatures in the fungal pathogen, Candida albicans

2023

Giuraniuc, C., Parkin, C., Almeida, M., Fricker, M., Shadmani, P., Nye, S., Wehmeier, S., Chawla, S., Bedekovic, T., Lehtovirta-Morley, L., Richards, D., Gow, N., Brand, A.

mBio, vol. 14, no. 5, e01157-23

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1128/mbio.01157-23
Open Access: http://aura.abdn.ac.uk/bitstreams/7909288d-0e06-491b-8b26-620db243e590/download

A variable heart rate multi-compartmental coupled model of the cardiovascular and respiratory systems

2023

Lishak, S., Grigorian, G., George, S. V., Ovenden, N. C., Shipley, R. J., Arridge, S.

Journal of the Royal Society Interface, vol. 20, no. 207, 20230339

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1098/rsif.2023.0339
Open Access: http://aura.abdn.ac.uk/bitstreams/307b39e3-0f39-4081-a171-48177354a652/download
Additional Links: View publication in Scopus

In vivo ultrafast Doppler imaging combined with confocal microscopy and behavioral approaches to gain insight into the central expression of Peripheral Neuropathy in Trembler-J Mice

2023

Martínez Barreriro, M., Vázquez Alberdi, L., De León, L., Avellana, G., Duarte, A., Fialho, M. A., Baranger, J., Calero, M., Rubido, N., Tanter, M., Negreira, C., Brum, J., Damián, J. P., Kun, A.

Biology, vol. 12, 1324

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/biology12101324
Open Access: http://aura.abdn.ac.uk/bitstreams/dd6706a6-b422-4ef0-8a41-e10b1072d2bd/download

Sleep disrupts complex spiking dynamics in the neocortex and hippocampus

2023

González, J., Cavelli, M., Bl Tort, A., Torterolo, P., Rubido, N.

PloS ONE, vol. 18, no. 8, 0290146

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1371/journal.pone.0290146
Open Access: http://aura.abdn.ac.uk/bitstreams/71bae9ef-8e2b-4139-a8ab-c95bacee2a09/download

Stability and Bautin bifurcation of four-wheel-steering vehicle system with driver steering control

2023

Miao, P., Li, D., Yue, Y., Grebogi, C.

Chaos, vol. 33, no. 8, 083122

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1063/5.0158869
Open Access: http://aura.abdn.ac.uk/bitstreams/d29b5509-6076-4e62-83f2-f18e1e8efc53/download

Structural connectivity modifications in the brain of selected patients with tumour after its removal by surgery (a case study)

2023

Sayari, E., Seifert, E. G., Cruziniani, F. E., Gabrick, E. C., Iarosz, K. C., Szezech Jr, J. D., Baptista, M. S., Caldas, I. L., Batista, A. M.

Physica. A, Statistical Mechanics and its Applications, vol. 623, 128849

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.physa.2023.128849
Open Access: http://aura.abdn.ac.uk/bitstreams/cb4c948b-7980-4213-bfeb-abbc6e6a459c/download

Construction of Piecewise Chaotic Maps With Tunable Statistical Mean

2023

Moysis, L., Lawnik, M., Baptista, M., Goudos, S., Volos, C.

Chapters in Books, Reports and Conference Proceedings: Conference Proceedings

Digital Object Identifier: https://doi.org/10.1109/MOCAST57943.2023.10176612

Early warning signals for critical transitions in complex systems

2023

George, S. V., Kachhara, S., Ambika, G.

Physica Scripta, vol. 98, no. 7, 072002

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.1088/1402-4896/acde20
Additional Links: View publication in Scopus

Ethnic differences in the indirect effects of the COVID-19 pandemic on clinical monitoring and hospitalisations for non-COVID conditions in England: a population-based, observational cohort study using the OpenSAFELY platform

2023

Costello, R. E., Tazare, J., Herrett, E., Parker, E. P., Zheng, B., Mansfield, K. E., Henderson, A. D., Carreira, H., Bidulka, P., Wong, A. Y., Warren-Gash, C., Eggo, R. M., Tomlinson, L., Langan, S. M., Mathur, R., Piehlmaier, D., MacKenna, B., Mehrkar, A., Piehlmaier, D., Hayes, J. F., Quint, J. K., Katikireddi, S. V., Mathur, R., Chaturvedi, N., Park, C., Carnemolla, A., Williams, D., Knueppel, A., Boyd, A., Turner, E. L., Evans, K. M., Thomas, R., Berman, S., McLachlan, S., Crane, M., Whitehorn, R., Oakley, J., Foster, D., Mitchell, R., Booth, C., Kennedy, J., Wright, J., Yang, T., Shah, S. A., Kopasker, D., Hughes, A., Perez-Reche, F., Smith, R. M., Brown, A. D., Harrison, D., The OpenSAFELY collaborative, LH&W NCS (or CONVALESCENCE) Collaborative

EClinicalMedicine, vol. 61, 102077

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.eclinm.2023.102077
Open Access: http://aura.abdn.ac.uk/bitstreams/9449d744-ee5f-474e-aaeb-30554eb08cf7/download
Additional Links: View publication in Scopus

Minimum taxi fleet algorithm considering human spatiotemporal behaviors

2023

Zhao, Z., Wang, Y., Nie, W., Lin, C., Cai, S., Grebogi, C.

Chaos, vol. 33, no. 6, 063158

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1063/5.0152728
Open Access: http://aura.abdn.ac.uk/bitstreams/a7d8fd45-1937-4224-b473-303ee0076966/download; http://aura.abdn.ac.uk/bitstreams/bfd11dde-f902-40e7-8f45-84521c369bc5/download

Double grazing bifurcation route in a quasiperiodically driven piecewise linear oscillator

2023

Liu, R., Grebogi, C., Yue, Y.

Chaos (Woodbury, N.Y.), vol. 33, no. 6, 063150

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1063/5.0146285
Open Access: http://aura.abdn.ac.uk/bitstreams/90e8ad40-3654-4a63-a520-3ef5000de88b/download
Additional Links: View publication in Scopus

Onsager coefficients in a coupled-transport model displaying a condensation transition

2023

Iubini, S., Politi, A., Politi, P.

New Journal of Physics, vol. 25, no. 6, 063020

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1088/1367-2630/acdd8c
Open Access: http://aura.abdn.ac.uk/bitstreams/e72d2db0-e6eb-43d0-9c4f-2894adcc5abe/download

Modelling the deactivation of Escherichia coli in Nigerian soils amended with differently treated manures

2023

Chukwu, V., Smith, J., Strachan, N., Avery, L.

Journal of Applied Microbiology, vol. 134, no. 6, lxad098

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1093/jambio/lxad098
Open Access: http://aura.abdn.ac.uk/bitstreams/eca98c63-9b42-491e-be79-bfb0856bd975/download

Plastic neural network with transmission delays promotes equivalence between function and structure

2023

Protachevicz, P. R., Borges, F. S., Marcos Batista, A., Baptista, M. S., Caldas, I. L., Macau, E. E. N., Lameu, E. L.

Chaos, Solitons and Fractals, vol. 171, 113480

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.chaos.2023.113480
Open Access: http://aura.abdn.ac.uk/bitstreams/d8daf2af-3ff0-4c95-9107-1d73dde09edb/download

Predicting recurrence of depression using cardiac complexity in individuals tapering antidepressants

2023

George, S. V., Kunkels, Y. K., Smit, A., Wichers, M., Snippe, E., van Roon, A. M., Riese, H.

Translational Psychiatry, vol. 13, 182

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1038/s41398-023-02474-7
Open Access: http://aura.abdn.ac.uk/bitstreams/3b76167a-7c66-4b3f-add1-c66fbfdfca7b/download
Additional Links: View publication in Scopus

The interface of disasters, sanitation, and poverty in Brazil: a sociological perspective

2023

Valencio, N., Valencio, A., Baptista, M. S.

Frontiers in Sustainable Cities, vol. 5, 1184532

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3389/frsc.2023.1184532
Open Access: http://aura.abdn.ac.uk/bitstreams/f762b144-921e-419d-88cb-293290c29f88/download

Roadmap for optical tweezers

2023

Volpe, G., Maragò, O. M., Rubinsztein-Dunlop, H., Pesce, G., Stilgoe, A. B., Volpe, G., Tkachenko, G., Truong, V. G., Chormaic, S. N., Kalantarifard, F., Elahi, P., Käll, M., Callegari, A., Marqués, M. I., Neves, A. A. R., Moreira, W. L., Fontes, A., Cesar, C. L., Saija, R., Saidi, A., Beck, P., Eismann, J. S., Banzer, P., Fernandes, T. F. D., Pedaci, F., Bowen, W. P., Vaippully, R., Lokesh, M., Roy, B., Thalhammer-Thurner, G., Ritsch-Marte, M., García, L. P., Arzola, A. V., Castillo, I. P., Argun, A., Muenker, T. M., Vos, B. E., Betz, T., Cristiani, I., Minzioni, P., Reece, P. J., Wang, F., McGloin, D., Ndukaife, J. C., Quidant, R., Roberts, R. P., Laplane, C., Volz, T., Gordon, R., Hanstorp, D., Marmolejo, J. T., Bruce, G. D., Dholakia, K., Li, T., Brzobohatý, O., Simpson, S. H., Zemánek, P., Ritort, F., Roichman, Y., Bobkova, V., Wittkowski, R., Denz, C., Kumar, G. V. P., Foti, A., Donato, M. G., Gucciardi, P. G., Gardini, L., Bianchi, G., Kashchuk, A. V., Capitanio, M., Paterson, L., Jones, P. H., Berg-Sørensen, K., Barooji, Y. F., Oddershede, L. B., Pouladian, P., Preece, D., Adiels, C. B., Luca, A. C. D., Magazzù, A., Ciriza, D. B., Iatì, M. A., Swartzlander, G. A.

JPhys Photonics, vol. 5, no. 2, 022501

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1088/2515-7647/acb57b
Open Access: http://aura.abdn.ac.uk/bitstreams/eec88fd9-25ac-4546-9d0d-fe4350d5f9d5/download
Additional Links: https://app.dimensions.ai/details/publication/pub.1154763659

Boundedness of solutions for a bouncing ball model with quasiperiodic moving wall

2023

Li, D., Zhang, X., Liu, X., Xie, J., Grebogi, C.

Chaos, Solitons & Fractals, vol. 169, 113268

Contributions to Journals: Articles

Online: https://www.sciencedirect.com/science/article/pii/S0960077923001698
Digital Object Identifier: https://doi.org/10.1016/j.chaos.2023.113268
Open Access: http://aura.abdn.ac.uk/bitstreams/79cc4efa-cc0e-4146-bc6a-25fe75055195/download

Chaotification of 1D maps by Multiple Remainder Operator Additions: Application to B-Spline Curve Encryption

2023

Moysis, L., Lawnik, M., Antoniades, I. P., Kafetzis, I., Baptista, M. S., Volos, C.

Symmetry-Basel, vol. 15, no. 3, 726

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.3390/sym15030726
Open Access: http://aura.abdn.ac.uk/bitstreams/070bc64f-73a2-4d1e-8d4e-8d1af61bd947/download

Trapped aerosol sizes under fiber-based counterpropagation optical trapping

2023

Zhang, L., Szmalenberg, A., Cook, K., Liu, B., Ding, L., Wang, F., McGloin, D.

Journal of the Optical Society of America B, vol. 40, no. 2, pp. 460-468

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1364/JOSAB.468638
Open Access: http://aura.abdn.ac.uk/bitstreams/75e9417c-4e8c-4240-8561-53ac4c6f6eeb/download

ExpressInHost: A codon tuning tool for the expression of recombinant proteins in host microorganisms

2023

Raguin, A., Stansfield, I., Romano, M. C.

Journal of Open Research Software, vol. 11, no. 2

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.5334/jors.385
Open Access: http://aura.abdn.ac.uk/bitstreams/946f13f2-f141-4eac-aa4e-2b92cd87fc68/download

Many-body spectral statistics of relativistic quantum billiard systems

2023

Chen, X., Chen, Z., Huang, L., Grebogi, C.

Physical Review Research, vol. 5, 013050

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1103/PhysRevResearch.5.013050
Open Access: http://aura.abdn.ac.uk/bitstreams/aee9ddb7-8aba-4e0f-aa25-da2e1ede6723/download

Counting the Acid Sites in a Commercial ZSM-5 Zeolite Catalyst

2023

Zachariou, A., Hawkins, A. P., Howe, R. F., Skakle, J. M. S., Barrow, N., Collier, P., Nye, D. W., Smith, R. I., Stenning, G. B. G., Parker, S. F., Lennon, D.

ACS physical chemistry Au, vol. 3, no. 1, pp. 74-83

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1021/acsphyschemau.2c00040
Open Access: http://aura.abdn.ac.uk/bitstreams/a58d09fa-a147-429c-8d27-137e2cfbcd55/download

Classifying motion states of AUV based on graph representation for multivariate time series

2023

Feng, C., Gao, S., Chen, S., Gao, Z., Grebogi, C.

Ocean Engineering, vol. 268, 113539

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.oceaneng.2022.113539
Open Access: http://aura.abdn.ac.uk/bitstreams/96a02064-f1e8-4cde-994e-fca486fe86a4/download

Flow Path Resistance in Heterogeneous Porous Media Recast into a Graph-Theory Problem

2023

Kanavas, Z., Pérez-Reche, F. J., Arns, F., Morales, V. L.

Transport in Porous Media, vol. 146, pp. 267-282

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1007/s11242-021-01671-6
Open Access: http://aura.abdn.ac.uk/bitstreams/7aac4875-8925-4fd9-bed3-b527fba3e6f9/download

Observable Unruh Effect and Unmasked Unruh Radiation

2022

Wang, C. H. -., Gregori, G., Bingham, R., Adamu, Y., Eneh, B. N., Rodriguez, M. C., Twigg, S.

Working Papers and Discussion Papers

Digital Object Identifier: https://doi.org/10.48550/arXiv.2212.13246
Open Access: http://aura.abdn.ac.uk/bitstreams/16b2dd82-6704-4980-8df4-6ee0a1105e52/download

The Use of Interdisciplinary Approaches to Understand the Biology of Campylobacter jejuni

2022

Dzianach, P. A., Pérez-Reche, F. J., Strachan, N. J., Forbes, K. J., Dykes, G. A.

Microorganisms, vol. 10, no. 12, 2498

Contributions to Journals: Review articles

Digital Object Identifier: https://doi.org/10.3390/microorganisms10122498
Open Access: http://aura.abdn.ac.uk/bitstreams/6b024e3c-f5b5-437e-bb6d-58889f312e6b/download
Additional Links: View publication in Scopus

Robustly fitting Gaussian graphical models: the R-package robFitConGraph

2022

Vogel, D., Watt, S. J., Wiedemann, A.

Working Papers and Discussion Papers

Online: http://arxiv.org/abs/2204.04291v1
Digital Object Identifier: https://doi.org/10.48550/arXiv.2204.04291
Open Access: http://aura.abdn.ac.uk/bitstreams/506e9306-ac64-4760-b28b-c413bd7ff17d/download

First Assimilation of Atmospheric Temperatures From the Emirates Mars InfraRed Spectrometer

2022

Young, R. M., Millour, E., Forget, F., Smith, M. D., Aljaberi, M., Edwards, C. S., Smith, N., Anwar, S., Christensen, P. R., Wolff, M.

Geophysical Research Letters, vol. 49, no. 21, e2022GL099656

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1029/2022GL099656
Open Access: http://aura.abdn.ac.uk/bitstreams/f9c3bccd-fdea-4f51-87de-e1691fe7d5d9/download
Additional Links: View publication in Scopus

Existence and Generation Mechanisms of Strange Nonchaotic Attractors in Axially Accelerating Beam Systems

2022

Yang, Q., Li, D., Chu, Y., Li, X., Grebogi, C.

International Journal of Bifurcation and Chaos, vol. 32, no. 14, 2250212

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1142/s0218127422502121

The Distinct Influence of Two Madden–Julian Trajectory Classes on the South American Dipole

2022

Díaz, N., Barreiro, M., Rubido, N.

Journal of climate, vol. 35, no. 21, pp. 3493-3507

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1175/JCLI-D-21-1001.1
Open Access: http://aura.abdn.ac.uk/bitstreams/efae6a89-322a-4d2b-b8a3-b2c1e901b10e/download
Additional Links: View publication in Scopus; https://abdn.elsevierpure.com/en/publications/ea3bec0a-76fb-4652-9a98-160368fa2aaf

Noise-induced artificial intelligence

2022

Zhao, A., Ermolaeva, A., Ullner, E., Kurths, J., Gordleeva, S., Zaikin, A.

Physical Review Research, vol. 4, no. 4, 043069

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1103/physrevresearch.4.043069
Open Access: http://aura.abdn.ac.uk/bitstreams/c547e2b0-5913-4e5e-989a-875ac3e1548a/download

A Frontal Dust Storm in the Northern Hemisphere at Solar Longitude 97: An Unusual Observation by the Emirates Mars Mission

2022

Gebhardt, C., Guha, B. K., Young, R. M., Wolff, M. J.

Geophysical Research Letters, vol. 49, no. 20, e2022GL099528

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1029/2022GL099528
Open Access: http://aura.abdn.ac.uk/bitstreams/39367477-b156-4f5d-ab23-fd56c6180ae5/download
Additional Links: View publication in Scopus

Importance of Numerical Implementation and Clustering Analysis in Force-Directed Algorithms for Accurate Community Detection

2022

Gouvêa, A. M. M. M., Rubido, N., Macau, E. E. N., Quiles, M. G.

Applied Mathematics and Computation, vol. 431, 127310

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1016/j.amc.2022.127310
Open Access: http://aura.abdn.ac.uk/bitstreams/f68660dc-4370-4981-b8d3-980b2f78de45/download

Double grazing bifurcations of the non-smooth railway wheelset systems

2022 - E-pub ahead of print

Miao, P., Li, D., Yin, S., Xie, J., Grebogi, C., Yue, Y.

Nonlinear Dynamics, vol. 111, pp. 2093-2110

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1007/s11071-022-07926-1

Birth of strange nonchaotic attractors in a piecewise linear oscillator

2022

Duan, J., Zhou, W., Li, D., Grebogi, C.

Chaos, vol. 32, no. 10, 103106

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1063/5.0096959
Open Access: http://aura.abdn.ac.uk/bitstreams/eaed3164-dafa-4949-9ca0-1db793d0c936/download; http://aura.abdn.ac.uk/bitstreams/d5ac2706-0173-4897-b2ac-42c552e51489/download
Additional Links: View publication in Scopus

Oral Tau Aggregation Inhibitor for Alzheimer’s Disease: Design, Progress and Basis for Selection of the 16 mg/day Dose in a Phase 3, Randomized, Placebo-Controlled Trial of Hydromethylthionine Mesylate

2022

Wischik, C. M., Bentham, P., Gauthier, S., Miller, S., Kook, K., Schelter, B. O.

Journal of Prevention of Alzheimer's Disease, vol. 9, pp. 780-790

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.14283/jpad.2022.63
Open Access: http://aura.abdn.ac.uk/bitstreams/4b8d981b-d1b0-43ab-bbbc-a90581c02b21/download
Additional Links: View publication in Scopus

Transfer Learning with Optimal Transportation and Frequency Mixup for EEG-based Motor Imagery Recognition

2022

Chen, P., Wang, H., Sun, X., Li, H., Grebogi, C., Gao, Z.

IEEE Transactions on Neural Systems and Rehabilitation Engineering, vol. 30, pp. 2866-2875

Contributions to Journals: Articles

Digital Object Identifier: https://doi.org/10.1109/tnsre.2022.3211881
Open Access: http://aura.abdn.ac.uk/bitstreams/9a8e3cee-fd77-4185-9d64-8e75cd82d4e6/download

Migrating Thermal Tides in the Martian Atmosphere During Aphelion Season Observed by EMM/EMIRS

2022

Fan, S., Forget, F., Smith, M. D., Guerlet, S., Badri, K. M., Atwood, S. A., Young, R. M., Edwards, C. S., Christensen, P. R., Deighan, J., Al Matroushi, H. R., Bierjon, A., Liu, J., Millour, E.

Geophysical Research Letters, vol. 49, no. 18, e2022GL099494

Contributions to Journals: Articles