Search Menu
People

Dr Bruce Milne

Dr Bruce Milne
Dr Bruce Milne
Dr Bruce Milne

MInstP, MRSC

Senior Research Fellow

About
Office Address
G25 Meston Building
Old Aberdeen Campus
Meston Walk
AB24 3UE

View on Map

School/Department
School of Natural and Computing Sciences

Biography

Previous positions

  • Honorary lecturer, Department of Chemistry, University of Aberdeen, Scotland 2021 - 2023
  • Invited professor, Departamento de Física, Universidade de Coimbra, Portugal 2021 - 2023
  • Research scientist, Departamento de Química, Universidade de Coimbra, Portugal 2017 - 2018
  • Invited researcher, Donostia International Physics Centre: Nano-Bio Spectroscopy Group and European Theoretical Spectroscopy Facility scientific development centre, Universidade de Pais Vasco, Donostia-San Sebastian, Spain 2013 - 2017
  • Research scientist, Centro de Física (CFisUC), Departamento de Física, Universidade de Coimbra, Portugal 2008 - 2021
  • Post-doctoral fellow, Faculdade de Farmácia, Universidade do Porto, Portugal 2004 - 2007
  • PDRA, Tau Therapeutics, University of Aberdeen, Aberdeen, Scotland 2002 - 2004
  • PDRA, Nutritional Chemistry Group, Rowett Research Institute, Aberdeen, Scotland 2002 - 2002
  • Laboratory technician, Department of Medicine and Therapeutics, University of Aberdeen, Aberdeen, Scotland 1991 - 1993

Qualifications

  • BSc (Hons) Chemistry 
    1998 - University of Aberdeen 
  • PhD Chemistry 
    2002 - University of Aberdeen 
Research

Research Areas

Physics

Supervising
View Research Area

Chemistry

Supervising
View Research Area

Biomedical Sciences

Supervising
View Research Area

Past Research

Software

pyBOILEDegg Program to predict absorption/distribution characteristics of molecules in the human body through likelihood of gastrointestinal absorption and ability to cross the blood-brain-barrier. https://github.com/bfmilne/pyBOILEDegg, 2021.

pyNCI Python tool for analyzing non-covalent interactions (NCIs) from electron density cube files. https://gitlab.com/diofalmeida/pynci/-/tree/master, 2020.

Open science discovery of potent noncovalent SARS-CoV-2 main protease inhibitors

An open science, crowdsourced drug discovery campaign against the SARS-CoV-2 Mpro led to a potent, noncovalent, and nonpeptidic inhibitor scaffold with lead-like properties. We generated copious structural, biochemical, and pharmacological data that were shared rapidly and openly, creating a rich, open, and intellectual property–free knowledge base for future anticoronavirus drug discovery.

Article in Science

Collaborations

COVID moonshot: Open science discovery of SARS-CoV-2 main protease inhibitors by combining crowdsourcing, high-throughput experiments, computational simulations, and machine learning.

Member of COVID Moonshot consortium. Article published in Science.

Wikipedia entry: https://en.wikipedia.org/wiki/COVID_Moonshot 

 

Industrial collaborations

TauRx Ltd University of Aberdeen, Aberdeen, Scotland. https://taurx.com/ (2020 – present)

GyreOx Ltd Rutherford Appleton Laboratory, Harwell, Oxfordshire, England. https://www.gyreox.com/ (2020 - 2023)

Lytix Biopharma AS P.O. Box 6447, NO-9294 Trømso, Norway. http://www.lytixbiopharma.com/ (2009 – 2010)

Aquapharm Biodiscovery Ltd European Centre for Marine Biotechnology, Dunbeg, Oban, Scotland. http://www.aquapharm.co.uk/ (2007 – 2008)

Supervision

My current supervision areas are: Physics, Chemistry, Biomedical Sciences.

I am currently supervising PhD researchers in the areas of

  • Real-space (time-dependent) density functional theory for organic (opto)electronic materials
  • Ensemble-based approaches to predicting solubilities for conformationally flexible solutes
  • Computer-aided drug design focussing on modified cyclic peptide ligands as potential therapeutic agents against Coronavirus infection and replication processes

Supervisees

Funding and Grants

Centre for Physics of the University of Coimbra, Portugal

The Centre for Physics of the University of Coimbra (CFisUC) is a Research Institute committed to excellence in Physics. CFisUC is located in the Physics Department of the Faculty of Science and Technology of the University of Coimbra. The centre results from the merger of the Centro de Física Computacional and of the Centro de Estudos de Materiais por Difração de Raios-X. It has strong collaborations with other research institutes in Coimbra: LIP, CNC, and CISUC.

Members of CFisUC are the Portuguese representatives in PRACE, the Partnership for Advanced Computing in Europe.

Supported by Fundação para Ciência e Tecnologia projects:

  • UIDB/04564/2020
  • UIDP/04564/2020
  • UID/FIS04564/2019
  • UID/FIS04564/2016

 

Cyclic peptide inhibitors of SARS-CoV-2 main protease

Milne, B. F., Principal Investigator, Chemistry (via Department of Physics, University of Coimbra)

  • Funder Project Reference: 2021.09804.CPCA

RNCA (National Network for Advanced Computing, FCT, Portugal): 1.2 Million core-hours on Navigator+ HPC system

UK financial equivalent: £120,000.00 

1/02/2022 → 31/01/2023

(NOTE: After the award was confirmed, the number core-hours was matched by the Laboratory for Advanced Computing which manage the Navigator+ system leading to a total of 2.4 million hours.)

DOWNSTREAM PROCESSING AND STRUCTURE CONFIRMATION OF CHEMOENZYMATICALLY PRODUCED MACROCYCLES

Jaspars, M., Principal Investigator, Chemistry

Milne, B. F., Co-Investigator, Chemistry

Houssen, W. E., Co-Investigator, Medical Sciences

  • Funder Project Reference: BB/W059899/1
  • Reference code: RG15926

BBSRC: £102,026.00

1/09/21 → 31/08/25

Publications

Page 1 of 10 Results 1 to 10 of 97

Show 10 | 25 | 50 | 100 results per page

Refine

Chapters in Books, Reports and Conference Proceedings

Contributions to Conferences

Contributions to Journals

Working Papers

Other Contributions

Update