Honorary Research Fellow
- About
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- School/Department
- School of Biological Sciences
Biography
I am mostly interested in exploring the processes driving the changes in accumulation and spatial distribution of species over time. In particular I look at how phylogenetic trees inform us about those processes. To answer some of my research questions, I develop the necessary computing tools. These approaches are based either on likelihood calculations or forward simulations. All realms of life are fascinating to me: my research interests includes birds, bats, palm trees, archeobacteria, butterflies, damselflies, amphipods, cichlids, and water beetles. I have a growing interest in building and programming electronics to collect data or tackle problems in our communities.
External Memberships
Researcher at the Faculty of Environmental Sciences, Czech University of Life Sciences Prague.
Editorial Board Member at BMC Ecology and Evolution (formerly known as BMC Evolutionary Biology)
Editorial Board Member at Scientific Reports
Latest Publications
Why Are Magnoliaceae So Diverse in the Tropics? Disentangling the Roles of Diversification and Time-for-Speciation Effects
Journal of Systematics and EvolutionContributions to Journals: ArticlesNovel phylogenomic and biogeographic insights into Palaquium and tribe Isonandreae (Sapotaceae)
Molecular Phylogenetics and Evolution, vol. 212, 108403Contributions to Journals: ArticlesOne omnivory does not rule them all: the importance of dietary differentiation in the diversification of phyllostomid bats
Evolution, qpaf174Contributions to Journals: ArticlesHigh-quality genome assembly and linkage map for a rapidly evolving plant species: Silene uniflora is potentially suitable
G3: Genes, Genomes, Genetics MissionContributions to Journals: ArticlesDifferent traits dominate evolution at early and late stages of adaptive radiation
Evolution, vol. 79, no. 6, pp. 1044–1055Contributions to Journals: Articles
- Publications
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Why Are Magnoliaceae So Diverse in the Tropics? Disentangling the Roles of Diversification and Time-for-Speciation Effects
Journal of Systematics and EvolutionContributions to Journals: ArticlesNovel phylogenomic and biogeographic insights into Palaquium and tribe Isonandreae (Sapotaceae)
Molecular Phylogenetics and Evolution, vol. 212, 108403Contributions to Journals: ArticlesOne omnivory does not rule them all: the importance of dietary differentiation in the diversification of phyllostomid bats
Evolution, qpaf174Contributions to Journals: ArticlesHigh-quality genome assembly and linkage map for a rapidly evolving plant species: Silene uniflora is potentially suitable
G3: Genes, Genomes, Genetics MissionContributions to Journals: ArticlesDifferent traits dominate evolution at early and late stages of adaptive radiation
Evolution, vol. 79, no. 6, pp. 1044–1055Contributions to Journals: ArticlesDisentangling evolutionary, geometric and ecological components of the elevational gradient of diversity
Evolution Letters, vol. 9, no. 1, pp. 51-64Contributions to Journals: ArticlesNiche breadth specialisation impacts ecological and evolutionary adaptation following environmental change
The ISME Journal, vol. 18, no. 1, wrae183Contributions to Journals: ArticlesAccounting for extinction dynamics unifies the geological and biological histories of Indo-Australian Archipelago
Proceedings of the Royal Society B: Biological Sciences, vol. 291, no. 2031, 20240966Contributions to Journals: ArticlesThe habitat breadth of phyllostomid bats is partially determined by their diet and could be used as a predictor of extinction risk
Biodiversity and Conservation, vol. 33, no. 11, pp. 3129–3144Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1007/s10531-024-02905-x
Citizen science data reveal altitudinal movement and seasonal ecosystem use by hummingbirds in the Andes Mountains
Ecography, vol. 2024, no. 3, e06735Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/ecog.06735
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstreams/27213861-cd84-4ccf-b9cc-9cbe1c9b8e53/download
- [ONLINE] View publication in Scopus
Reconstructing ancient dispersal through Antarctica: A case study of stream-inhabiting beetles
Journal of Biogeography, vol. 50, no. 11, pp. 1939-1954Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/jbi.14702
Apparent effect of range size and fruit colour on palm diversification may be spurious
Journal of Biogeography, vol. 50, no. 10, pp. 1724-1736Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/jbi.14683
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstreams/d963a95c-4f48-407d-beb4-da4e2f2d8270/download
- [ONLINE] View publication in Scopus
Thermal niche breadth and its relationship with sturnira bat species diversification
Journal of Thermal Biology, vol. 117, 103697Contributions to Journals: ArticlesImpact of Phylogenetic Tree Completeness and Misspecification of Sampling Fractions on Trait Dependent Diversification Models
Systematic Biology, vol. 72, no. 1, pp. 106-119Contributions to Journals: ArticlesSafeguarding imperiled biodiversity and evolutionary processes in the Wallacea center of endemism
BioScience, vol. 72, no. 11, pp. 1118-1130Contributions to Journals: ArticlesThe missing link in biogeographic reconstruction: Accounting for lineage extinction rewrites history
Journal of Biogeography, vol. 49, no. 11, pp. 1941-1951Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/jbi.14489
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstreams/5ae3a177-5b91-4513-a42c-f09dc031bc1d/download
Reconstruction of State-Dependent Diversification: Integrating Phenotypic Traits into Molecular Phylogenies
Environmental Microbial Evolution: Methods and Protocols. Luo, H. (ed.). 1 edition. Springer, pp. 305-326, 22 pagesChapters in Books, Reports and Conference Proceedings: Chapters- [ONLINE] DOI: https://doi.org/10.1007/978-1-0716-2691-7_15
Fauxcurrence: simulating multi-species occurrences for null models in species distribution modelling and biogeography
Ecography, vol. 2022, no. 7, e05880Contributions to Journals: ArticlesMiocene Climate and Habitat Change Drove Diversification in Bicyclus, Africa’s Largest Radiation of Satyrine Butterflies
Systematic Biology, vol. 71, no. 3, pp. 570–588Contributions to Journals: ArticlesEvolutionary dynamics of the elevational diversity gradient in passerine birds
Nature Ecology & Evolution, vol. 5, pp. 1259-1265Contributions to Journals: ArticlesAncient geological dynamics impact neutral biodiversity accumulation and are detectable in phylogenetic reconstructions
Global Ecology and Biogeography, vol. 38, no. 8, pp. 1633–1642Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/geb.13326
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstreams/11ceeda9-b75f-4c58-b978-c771e73dd7d7/download
- [ONLINE] View publication in Scopus
The spatial analysis of biological interactions: morphological variation responding to the co‐occurrence of competitors and resources
Journal of Avian Biology, vol. 50, no. 12, e02223Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/jav.02223
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstreams/e1ce1bdd-35fc-4f2c-8c36-4c49a4c5d564/download
Detecting the Dependence of Diversification on Multiple Traits from Phylogenetic Trees and Trait Data
Systematic Biology, vol. 68, no. 2, pp. 317-328Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1093/sysbio/syy057
- [ONLINE] View publication in Scopus
- [ONLINE] View publication in Mendeley
Body mass as a supertrait linked to abundance and behavioral dominance in hummingbirds: A phylogenetic approach
Ecology and Evolution, vol. 9, no. 4, pp. 1623-1637Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/ece3.4785
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstreams/2059847d-d9e3-4dfb-a151-d9a71a524336/download
- [ONLINE] View publication in Mendeley
The influence of ecological and geographic limits on the evolution of species distributions and diversity
Evolution, vol. 72, no. 10, pp. 1978-1991Contributions to Journals: ArticlesTo adapt or go extinct? The fate of megafaunal palm fruits under past global change
Proceedings of the Royal Society B: Biological Sciences, vol. 285, no. 1880, 20180882Contributions to Journals: Articles- [ONLINE] http://apps.kew.org/wcsp
- [ONLINE] DOI: https://doi.org/10.1098/rspb.2018.0882
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstreams/14be7c4e-e9d7-40ba-a472-9c4bd261d636/download
Ecomorphological structure of avian communities changes upon arrival of wintering species
Basic and Applied Ecology, vol. 24, pp. 60-67Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.baae.2017.08.008
Digestive capacity predicts diet diversity in Neotropical frugivorous bats
Journal of Animal Ecology, vol. 84, no. 5, pp. 1396-1404Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1111/1365-2656.12383
Migration of Franklin's Gull (Leucophaeus pipixcan) and its variable annual risk from wind power facilities across the Tehuantepec Isthmus
Journal for Nature Conservation , vol. 25, pp. 72-76Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1016/j.jnc.2015.03.006
Biologic interactions determining geographic range size: a one species response to phylogenetic community structure
Ecology and Evolution, vol. 4, no. 7, pp. 968-976Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1002/ece3.959
- [OPEN ACCESS] http://aura.abdn.ac.uk/bitstreams/2ac266d3-624f-4cf0-8701-c9f34e84e828/download
Soaring Migratory Birds Avoid Wind Farm in the Isthmus of Tehuantepec, Southern Mexico
PloS ONE, vol. 9, no. 3, 0092462Contributions to Journals: ArticlesBird communities and wind farms: a phylogenetic and morphological approach
Biodiversity and Conservation, vol. 22, no. 12, pp. 2821-2836Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1007/s10531-013-0557-6
Bird-Community Shifts in Relation to Wind Farms: A Case Study Comparing a Wind Farm, Croplands, and Secondary Forests in Southern Mexico
Condor, vol. 114, no. 4, pp. 711-719Contributions to Journals: Articles- [ONLINE] DOI: https://doi.org/10.1525/cond.2012.110130