Variant Calling, Annotation and Association Analyses
Comprehensive service typically 6-26 weeks:
- QC of data.
- Alignment to reference:
- Good quality reference that is the same species/strain as your experimental samples.
- Reference is poor quality and/or is a different strain to the experimental samples.
- Variant calling and filtering.
- OPTIONAL: Variant effect prediction, variant annotation and refinement of candidates.
- OPTIONAL: Association analyses.
- Publication quality visualisation and reporting.
- Input to publication, including revisions and resubmissions.