RNA-Seq for de novo Transcriptome Assembly
Comprehensive service typically 8-26 weeks:
- QC of data.
- OPTIONAL: Removal of contamination reads e.g. from host.
- Assembly with different assembler tools.
- Assembly metrics and comparisons. Selection of best assembly.
- Annotation of assembly:
- Annotation with Trinotate.
- Comparison to closely related species.
- OPTIONAL: Iterative biology drive, in depth annotation of specific loci of interest.
- Publication quality visualisation and reporting.
- Input to publication, including revisions and resubmissions.