ChIP-seq

Please discuss your design and aims with us to determine bioinformatics time required. Typically 8-14 weeks for comprehensive analysis of straightforward design:

  1. QC of data.
  2. Alignment to reference:
    1. Good quality reference that is the same species/strain as your experimental samples.
    2. Reference is poor quality and/or is a different strain to the experimental samples. 
  3. Peak calling and QC of results.
  4. Peak annotation and motif analysis.
  5. Publication quality visualisation and reporting.
  6. Input to publication, including revisions and resubmissions.